STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0095Identified by match to protein family HMM; Belongs to the glycosyltransferase 26 family. (316 aa)    
Predicted Functional Partners:
CC_0817
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.732
CC_1486
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.649
PssZ
Exopolysaccharide production protein Pss; Similar to SP:P10498 GB:X12568 PID:581513; identified by sequence similarity; putative.
    
 0.622
hfsE
HfsE; Identified by Glimmer2; putative.
  
 0.579
CC_0096
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM.
       0.568
hfsF
HfsF; Identified by match to protein family HMM.
 
  
 0.544
CC_0164
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
 0.479
pssY
Exopolysaccharide production protein PssY; Is likely the initiating enzyme for holdfast polysaccharide synthesis. Catalyzes the transfer of the glucose-1-phosphate moiety from UDP-Glc onto the carrier lipid undecaprenyl phosphate (C55-P), forming a phosphoanhydride bond yielding to glucosyl-pyrophosphoryl- undecaprenol (Glc-PP-C55). Also possesses a weak galactose-1-P transferase activity; Belongs to the bacterial sugar transferase family.
   
 0.475
hfsC
HfsC; Identified by Glimmer2; putative.
 
  
 0.452
hfsI
HfsI; Identified by Glimmer2; putative.
 
  
 0.434
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.