STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0104Gamma-glutamyltransferase; Identified by match to TIGR protein family HMM TIGR00066. (583 aa)    
Predicted Functional Partners:
gshB
Glutathione synthetase; Identified by match to protein family HMM.
  
 
 0.974
CC_1730
Glutathione peroxidase; Identified by match to PFAM protein family HMM PF00255; Belongs to the glutathione peroxidase family.
     
 0.934
CC_2302
Glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.934
CC_0531
Gamma-glutamyltransferase; Identified by match to TIGR protein family HMM TIGR00066.
  
  
 
0.918
CC_0984
Gamma-glutamyltransferase; Identified by match to TIGR protein family HMM TIGR00066.
  
 
 
0.915
CC_2369
Hydantoinase/oxoprolinase; Identified by match to protein family HMM.
    
 0.913
pepA
Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.908
pepA-2
Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.905
pepN
Aminopeptidase N; Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.
   
 
 0.905
CC_2937
Identified by match to protein family HMM; Belongs to the peptidase M17 family.
     
 0.905
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.