Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CC_01243-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)    
Predicted Functional Partners:
CC_1813
Identified by match to PFAM protein family HMM PF00378.
 
 0.706
CC_1352
Identified by match to PFAM protein family HMM PF00378.
  
 
  0.673
CC_0076
Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.
  
 0.669
CC_0947
Identified by match to PFAM protein family HMM PF00378.
   
  0.631
CC_2575
Identified by match to PFAM protein family HMM PF00378.
   
  0.628
CC_1723
Identified by match to PFAM protein family HMM PF00378.
   
  0.617
CC_1851
Identified by match to PFAM protein family HMM PF00378.
   
  0.617
CC_2401
Identified by match to PFAM protein family HMM PF00378.
   
  0.617
CC_0353
Identified by match to PFAM protein family HMM PF00378.
   
  0.616
CC_0397
Identified by match to PFAM protein family HMM PF00378.
   
  0.615
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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