Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0155 | CC_0157 | CC_0155 | CC_0157 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM. | 0.409 |
| CC_0155 | CC_0158 | CC_0155 | CC_0158 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.409 |
| CC_0155 | CC_0181 | CC_0155 | CC_0181 | Conserved hypothetical protein; Identified by Glimmer2; putative. | General secretion pathway protein L, putative; Similar to GB:X66504 SP:P45789 PID:414849; identified by sequence similarity; putative. | 0.431 |
| CC_0155 | dnaN | CC_0155 | CC_0156 | Conserved hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.511 |
| CC_0157 | CC_0155 | CC_0157 | CC_0155 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.409 |
| CC_0157 | CC_0158 | CC_0157 | CC_0158 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.778 |
| CC_0157 | dnaN | CC_0157 | CC_0156 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.604 |
| CC_0158 | CC_0155 | CC_0158 | CC_0155 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.409 |
| CC_0158 | CC_0157 | CC_0158 | CC_0157 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, ArsR family; Identified by match to protein family HMM. | 0.778 |
| CC_0158 | dnaN | CC_0158 | CC_0156 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.603 |
| CC_0181 | CC_0155 | CC_0181 | CC_0155 | General secretion pathway protein L, putative; Similar to GB:X66504 SP:P45789 PID:414849; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.431 |
| dnaN | CC_0155 | CC_0156 | CC_0155 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.511 |
| dnaN | CC_0157 | CC_0156 | CC_0157 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Transcriptional regulator, ArsR family; Identified by match to protein family HMM. | 0.604 |
| dnaN | CC_0158 | CC_0156 | CC_0158 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; Identified by Glimmer2; putative. | 0.603 |