STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pssYExopolysaccharide production protein PssY; Is likely the initiating enzyme for holdfast polysaccharide synthesis. Catalyzes the transfer of the glucose-1-phosphate moiety from UDP-Glc onto the carrier lipid undecaprenyl phosphate (C55-P), forming a phosphoanhydride bond yielding to glucosyl-pyrophosphoryl- undecaprenol (Glc-PP-C55). Also possesses a weak galactose-1-P transferase activity; Belongs to the bacterial sugar transferase family. (267 aa)    
Predicted Functional Partners:
CC_0164
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.906
CC_1011
Identified by match to protein family HMM.
 
  
 0.811
hfsC
HfsC; Identified by Glimmer2; putative.
  
  
 0.802
hfsD
HfsD; Identified by Glimmer2; putative.
 
  
 0.778
hfsI
HfsI; Identified by Glimmer2; putative.
  
  
 0.751
CC_0169
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.667
CC_3210
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.646
hfsF
HfsF; Identified by match to protein family HMM.
  
  
 0.643
hfsG
Identified by match to protein family HMM.
  
  
 0.606
hfsE
HfsE; Identified by Glimmer2; putative.
 
  
0.545
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.