STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0201Identified by match to protein family HMM. (226 aa)    
Predicted Functional Partners:
CC_0202
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.781
tolB
tolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.722
CC_0203
Hypothetical protein; Identified by Glimmer2; putative.
       0.718
CC_0747
Identified by match to protein family HMM.
  
 
 0.657
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.567
pal
OmpA family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.565
CC_0200
Oxidoreductase iron/ascorbate family; Identified by match to protein family HMM; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.517
CC_1603
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.471
dipM
Peptidase, M23/M37 family; Identified by match to protein family HMM.
  
 
 0.468
CC_1914
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.460
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.