STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0234Flagellin modification protein FlmB; Identified by match to PFAM protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. (402 aa)    
Predicted Functional Partners:
CC_0233
Flagellin modification protein FlmA; Identified by match to protein family HMM.
  
 0.984
CC_3210
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.891
hfsE
HfsE; Identified by Glimmer2; putative.
 
  
 0.846
CC_2854
Flagellin modification protein FlmD; Similar to PID:903375; identified by sequence similarity; putative.
 
  
 0.803
CC_2868
neuB protein, putative; Similar to GB:U05248 PID:454081; identified by sequence similarity; putative.
 
  
 0.790
CC_2853
Flagellin modification protein FlmC; Identified by match to protein family HMM.
 
  
 0.698
CC_2015
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM.
  
 0.673
CC_3575
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.646
CC_1011
Identified by match to protein family HMM.
  
 0.638
CC_3629
dTDP-D-glucose-4,6-dehydratase; Identified by match to protein family HMM; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.580
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.