Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC_0255 | CC_0256 | CC_0255 | CC_0256 | Similar to GP:3649751; identified by sequence similarity; putative. | Pyridoxine kinase; Identified by match to protein family HMM; Belongs to the pyridoxine kinase family. | 0.731 |
CC_0255 | CC_1134 | CC_0255 | CC_1134 | Similar to GP:3649751; identified by sequence similarity; putative. | Fructokinase; Identified by match to protein family HMM. | 0.558 |
CC_0255 | CC_1502 | CC_0255 | CC_1502 | Similar to GP:3649751; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.531 |
CC_0255 | CC_1567 | CC_0255 | CC_1567 | Similar to GP:3649751; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.549 |
CC_0255 | CC_1568 | CC_0255 | CC_1568 | Similar to GP:3649751; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.550 |
CC_0255 | CC_2105 | CC_0255 | CC_2105 | Similar to GP:3649751; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.602 |
CC_0255 | CC_2278 | CC_0255 | CC_2278 | Similar to GP:3649751; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.470 |
CC_0255 | CC_3628 | CC_0255 | CC_3628 | Similar to GP:3649751; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.558 |
CC_0255 | CC_3689 | CC_0255 | CC_3689 | Similar to GP:3649751; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.455 |
CC_0255 | ahcY | CC_0255 | CC_0257 | Similar to GP:3649751; identified by sequence similarity; putative. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.479 |
CC_0256 | CC_0255 | CC_0256 | CC_0255 | Pyridoxine kinase; Identified by match to protein family HMM; Belongs to the pyridoxine kinase family. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.731 |
CC_0256 | ahcY | CC_0256 | CC_0257 | Pyridoxine kinase; Identified by match to protein family HMM; Belongs to the pyridoxine kinase family. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.541 |
CC_1134 | CC_0255 | CC_1134 | CC_0255 | Fructokinase; Identified by match to protein family HMM. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.558 |
CC_1502 | CC_0255 | CC_1502 | CC_0255 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.531 |
CC_1567 | CC_0255 | CC_1567 | CC_0255 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.549 |
CC_1567 | CC_1568 | CC_1567 | CC_1568 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.534 |
CC_1568 | CC_0255 | CC_1568 | CC_0255 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.550 |
CC_1568 | CC_1567 | CC_1568 | CC_1567 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.534 |
CC_2105 | CC_0255 | CC_2105 | CC_0255 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.602 |
CC_2278 | CC_0255 | CC_2278 | CC_0255 | Hypothetical protein; Identified by Glimmer2; putative. | Similar to GP:3649751; identified by sequence similarity; putative. | 0.470 |
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