lovR protein (Caulobacter vibrioides CB15) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

lovR

Response regulator LovR; Identified by match to protein family HMM. (152 aa)

Predicted Functional Partners:

lovK

0.990

CC_0629

0.801

CC_3058

0.795

CC_2554

0.786

CC_3170

0.777

CC_3474

0.777

CC_3198

0.775

CC_1683

0.766

CC_2909

0.758

CC_0836

0.738

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0629	CC_0836	CC_0629	CC_0836	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.575
CC_0629	CC_1683	CC_0629	CC_1683	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative.	0.465
CC_0629	CC_2554	CC_0629	CC_2554	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.561
CC_0629	CC_2909	CC_0629	CC_2909	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.475
CC_0629	CC_3058	CC_0629	CC_3058	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Response regulator/sensor histidine kinase; Identified by match to protein family HMM.	0.748
CC_0629	CC_3170	CC_0629	CC_3170	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.592
CC_0629	CC_3198	CC_0629	CC_3198	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.888
CC_0629	lovK	CC_0629	CC_0285	Sensor histidine kinase, putative; Identified by match to protein family HMM.	LOV histidine kinase LovK; Identified by match to protein family HMM.	0.959
CC_0629	lovR	CC_0629	CC_0284	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Response regulator LovR; Identified by match to protein family HMM.	0.801
CC_0836	CC_0629	CC_0836	CC_0629	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.575
CC_0836	CC_1683	CC_0836	CC_1683	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative.	0.472
CC_0836	CC_2909	CC_0836	CC_2909	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.490
CC_0836	CC_3058	CC_0836	CC_3058	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Response regulator/sensor histidine kinase; Identified by match to protein family HMM.	0.668
CC_0836	CC_3170	CC_0836	CC_3170	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.446
CC_0836	CC_3198	CC_0836	CC_3198	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.857
CC_0836	CC_3474	CC_0836	CC_3474	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.671
CC_0836	lovK	CC_0836	CC_0285	Sensor histidine kinase, putative; Identified by match to protein family HMM.	LOV histidine kinase LovK; Identified by match to protein family HMM.	0.853
CC_0836	lovR	CC_0836	CC_0284	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Response regulator LovR; Identified by match to protein family HMM.	0.738
CC_1683	CC_0629	CC_1683	CC_0629	Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.465
CC_1683	CC_0836	CC_1683	CC_0836	Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.472