Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0288 | CC_0289 | CC_0288 | CC_0289 | Hypothetical protein; Identified by Glimmer2; putative. | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | 0.572 |
| CC_0288 | CC_0290 | CC_0288 | CC_0290 | Hypothetical protein; Identified by Glimmer2; putative. | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.418 |
| CC_0288 | CC_0291 | CC_0288 | CC_0291 | Hypothetical protein; Identified by Glimmer2; putative. | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.454 |
| CC_0289 | CC_0288 | CC_0289 | CC_0288 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| CC_0289 | CC_0290 | CC_0289 | CC_0290 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.533 |
| CC_0289 | CC_0291 | CC_0289 | CC_0291 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.531 |
| CC_0289 | CC_0294 | CC_0289 | CC_0294 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Phosphate regulon response regulator PhoB; Identified by match to protein family HMM. | 0.997 |
| CC_0289 | CC_0652 | CC_0289 | CC_0652 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | 0.591 |
| CC_0289 | phoU | CC_0289 | CC_0293 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Phosphate transport regulon regulator PhoU; Plays a role in the regulation of phosphate uptake. | 0.550 |
| CC_0289 | pstB | CC_0289 | CC_0292 | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.457 |
| CC_0290 | CC_0288 | CC_0290 | CC_0288 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Hypothetical protein; Identified by Glimmer2; putative. | 0.418 |
| CC_0290 | CC_0289 | CC_0290 | CC_0289 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Phosphate regulon sensor histidine kinase PhoR; Identified by match to protein family HMM. | 0.533 |
| CC_0290 | CC_0291 | CC_0290 | CC_0291 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.999 |
| CC_0290 | CC_0294 | CC_0290 | CC_0294 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Phosphate regulon response regulator PhoB; Identified by match to protein family HMM. | 0.564 |
| CC_0290 | CC_0652 | CC_0290 | CC_0652 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | 0.424 |
| CC_0290 | CC_1515 | CC_0290 | CC_1515 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative; Identified by match to PFAM protein family HMM PF01449. | 0.999 |
| CC_0290 | cysC | CC_0290 | CC_1482 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.416 |
| CC_0290 | phoU | CC_0290 | CC_0293 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Phosphate transport regulon regulator PhoU; Plays a role in the regulation of phosphate uptake. | 0.918 |
| CC_0290 | pstB | CC_0290 | CC_0292 | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.999 |
| CC_0291 | CC_0288 | CC_0291 | CC_0288 | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.454 |
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