Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC_0307 | CC_0308 | CC_0307 | CC_0308 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to PFAM protein family HMM PF00459. | 0.972 |
CC_0307 | CC_0309 | CC_0307 | CC_0309 | Hypothetical protein; Identified by Glimmer2; putative. | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | 0.737 |
CC_0307 | CC_0310 | CC_0307 | CC_0310 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.575 |
CC_0308 | CC_0307 | CC_0308 | CC_0307 | Identified by match to PFAM protein family HMM PF00459. | Hypothetical protein; Identified by Glimmer2; putative. | 0.972 |
CC_0308 | CC_0309 | CC_0308 | CC_0309 | Identified by match to PFAM protein family HMM PF00459. | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | 0.814 |
CC_0308 | CC_0310 | CC_0308 | CC_0310 | Identified by match to PFAM protein family HMM PF00459. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.616 |
CC_0308 | CC_0311 | CC_0308 | CC_0311 | Identified by match to PFAM protein family HMM PF00459. | Hypothetical protein; Identified by Glimmer2; putative. | 0.441 |
CC_0308 | CC_0312 | CC_0308 | CC_0312 | Identified by match to PFAM protein family HMM PF00459. | Hypothetical protein; Identified by Glimmer2; putative. | 0.440 |
CC_0308 | CC_0313 | CC_0308 | CC_0313 | Identified by match to PFAM protein family HMM PF00459. | Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UbiD family. | 0.415 |
CC_0309 | CC_0307 | CC_0309 | CC_0307 | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | Hypothetical protein; Identified by Glimmer2; putative. | 0.737 |
CC_0309 | CC_0308 | CC_0309 | CC_0308 | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | Identified by match to PFAM protein family HMM PF00459. | 0.814 |
CC_0309 | CC_0310 | CC_0309 | CC_0310 | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.643 |
CC_0309 | CC_0311 | CC_0309 | CC_0311 | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | Hypothetical protein; Identified by Glimmer2; putative. | 0.441 |
CC_0309 | CC_0312 | CC_0309 | CC_0312 | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | Hypothetical protein; Identified by Glimmer2; putative. | 0.440 |
CC_0309 | CC_0313 | CC_0309 | CC_0313 | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UbiD family. | 0.525 |
CC_0310 | CC_0307 | CC_0310 | CC_0307 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.575 |
CC_0310 | CC_0308 | CC_0310 | CC_0308 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Identified by match to PFAM protein family HMM PF00459. | 0.616 |
CC_0310 | CC_0309 | CC_0310 | CC_0309 | Conserved hypothetical protein; Identified by Glimmer2; putative. | pmbA protein; Identified by match to PFAM protein family HMM PF01523. | 0.643 |
CC_0310 | CC_0311 | CC_0310 | CC_0311 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.560 |
CC_0310 | CC_0312 | CC_0310 | CC_0312 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.550 |
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