STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0311Hypothetical protein; Identified by Glimmer2; putative. (623 aa)    
Predicted Functional Partners:
CC_0312
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_2198
Identified by match to PFAM protein family HMM PF01433.
 
   
 0.716
CC_0313
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UbiD family.
       0.697
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.649
obg
GTP-binding protein CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.637
CC_2968
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.586
CC_0199
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.583
CC_2154
Dipeptidyl peptidase IV; Identified by match to PFAM protein family HMM PF00930.
 
     0.576
CC_2461
Alkaline phosphatase, putative; Identified by match to protein family HMM.
  
  
  0.574
CC_2734
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.573
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.