STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0324NADH dehydrogenase; Identified by match to PFAM protein family HMM PF00881. (220 aa)    
Predicted Functional Partners:
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
    0.560
CC_0326
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.533
CC_0472
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.516
CC_0473
Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
     
 0.504
CC_0474
Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.
   
 
  0.503
CC_1771
Ubiquinol oxidase subunit III; Identified by match to protein family HMM.
   
 
  0.503
CC_0762
Cytochrome d ubiquinol oxidase subunit I; Identified by match to PFAM protein family HMM PF01654.
     
  0.499
CC_0763
Cytochrome d ubiquinol oxidase subunit II; Identified by match to TIGR protein family HMM TIGR00203.
     
  0.499
CC_1770
Ubiquinol oxidase subunit IV; Similar to GB:X78196 PID:461330; identified by sequence similarity; putative.
     
  0.499
CC_1772
Ubiquinol oxidase subunit I; Identified by match to protein family HMM; Belongs to the heme-copper respiratory oxidase family.
     
  0.499
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.