STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC_0331Hypothetical protein; Identified by Glimmer2; putative. (186 aa)    
Predicted Functional Partners:
CC_0330
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.890
CC_3036
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.726
CC_0332
Hypothetical protein; Identified by Glimmer2; putative.
       0.651
CC_0333
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.635
CC_0334
Transcriptional regulator, TetR family; Identified by match to protein family HMM.
       0.606
CC_0335
TonB-dependent receptor; Identified by match to protein family HMM.
       0.606
CC_2345
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0262 family.
  
   
 0.562
CC_1021
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.538
CC_0189
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.536
CC_0226
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0386 family.
      
 0.471
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.