STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0345Conserved hypothetical protein; Identified by Glimmer2; putative. (226 aa)    
Predicted Functional Partners:
xerC
Integrase/recombinase XerC, putative; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
    0.812
CC_1485
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.767
CC_0937
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.737
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
    0.700
flaEY
Regulatory protein FlaEY; Functions in trans to modulate the level of transcription of the flagellin genes and several genes encoding chemotaxis functions. It is itself temporally controlled.
  
    0.679
CC_1125
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.677
CC_2090
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.676
CC_3750
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.668
CC_1842
Response regulator, putative; Identified by match to protein family HMM.
  
     0.658
CC_1126
Identified by match to protein family HMM.
  
    0.657
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.