Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC_0345 | CC_0350 | CC_0345 | CC_0350 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.507 |
CC_0345 | CC_1485 | CC_0345 | CC_1485 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.767 |
CC_0345 | CC_1842 | CC_0345 | CC_1842 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Response regulator, putative; Identified by match to protein family HMM. | 0.658 |
CC_0348 | CC_0349 | CC_0348 | CC_0349 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
CC_0348 | CC_0350 | CC_0348 | CC_0350 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.461 |
CC_0349 | CC_0348 | CC_0349 | CC_0348 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
CC_0349 | CC_0350 | CC_0349 | CC_0350 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.461 |
CC_0349 | CC_1485 | CC_0349 | CC_1485 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.453 |
CC_0349 | CC_3231 | CC_0349 | CC_3231 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.419 |
CC_0350 | CC_0345 | CC_0350 | CC_0345 | Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.507 |
CC_0350 | CC_0348 | CC_0350 | CC_0348 | Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.461 |
CC_0350 | CC_0349 | CC_0350 | CC_0349 | Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.461 |
CC_0350 | CC_0351 | CC_0350 | CC_0351 | Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
CC_0350 | CC_0352 | CC_0350 | CC_0352 | Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.404 |
CC_0350 | CC_1485 | CC_0350 | CC_1485 | Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.442 |
CC_0350 | CC_1842 | CC_0350 | CC_1842 | Identified by match to protein family HMM. | Response regulator, putative; Identified by match to protein family HMM. | 0.452 |
CC_0350 | CC_3231 | CC_0350 | CC_3231 | Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.416 |
CC_0350 | flbA | CC_0350 | CC_1457 | Identified by match to protein family HMM. | Flagellin modification protein FlmG; Identified by match to protein family HMM. | 0.448 |
CC_0351 | CC_0350 | CC_0351 | CC_0350 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.572 |
CC_0351 | CC_0352 | CC_0351 | CC_0352 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.517 |
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