STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnCPhosphonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (264 aa)    
Predicted Functional Partners:
CC_0362
Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative.
 
 0.999
CC_0363
Phosphonates ABC transporter, permease protein; Identified by match to protein family HMM.
 
 0.997
CC_1440
Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM.
 
    0.901
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
  
 0.746
rutD
Hydrolase, alpha/beta hydrolase fold family; May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Belongs to the AB hydrolase superfamily. Hydrolase RutD family.
      
 0.730
CC_1518
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
 
    
0.724
CC_3280
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
 
    
0.581
CC_0364
CBS domain protein; Identified by match to protein family HMM.
       0.476
phoU
Phosphate transport regulon regulator PhoU; Plays a role in the regulation of phosphate uptake.
 
 
  
 0.431
nadA
Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
      
 0.418
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.