Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0291 | CC_0362 | CC_0291 | CC_0362 | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | 0.437 |
| CC_0291 | CC_1515 | CC_0291 | CC_1515 | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative; Identified by match to PFAM protein family HMM PF01449. | 0.999 |
| CC_0291 | phoU | CC_0291 | CC_0293 | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | Phosphate transport regulon regulator PhoU; Plays a role in the regulation of phosphate uptake. | 0.992 |
| CC_0291 | pstB | CC_0291 | CC_0292 | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.999 |
| CC_0348 | CC_0362 | CC_0348 | CC_0362 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | 0.402 |
| CC_0348 | CC_0937 | CC_0348 | CC_0937 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.441 |
| CC_0362 | CC_0291 | CC_0362 | CC_0291 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Phosphate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.437 |
| CC_0362 | CC_0348 | CC_0362 | CC_0348 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.402 |
| CC_0362 | CC_0363 | CC_0362 | CC_0363 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Phosphonates ABC transporter, permease protein; Identified by match to protein family HMM. | 0.998 |
| CC_0362 | CC_0364 | CC_0362 | CC_0364 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | CBS domain protein; Identified by match to protein family HMM. | 0.480 |
| CC_0362 | CC_0937 | CC_0362 | CC_0937 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.754 |
| CC_0362 | CC_1375 | CC_0362 | CC_1375 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.455 |
| CC_0362 | CC_1515 | CC_0362 | CC_1515 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative; Identified by match to PFAM protein family HMM PF01449. | 0.450 |
| CC_0362 | phnC | CC_0362 | CC_0361 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Phosphonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.999 |
| CC_0362 | phoU | CC_0362 | CC_0293 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Phosphate transport regulon regulator PhoU; Plays a role in the regulation of phosphate uptake. | 0.431 |
| CC_0362 | pstB | CC_0362 | CC_0292 | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.577 |
| CC_0363 | CC_0362 | CC_0363 | CC_0362 | Phosphonates ABC transporter, permease protein; Identified by match to protein family HMM. | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | 0.998 |
| CC_0363 | CC_0364 | CC_0363 | CC_0364 | Phosphonates ABC transporter, permease protein; Identified by match to protein family HMM. | CBS domain protein; Identified by match to protein family HMM. | 0.476 |
| CC_0363 | phnC | CC_0363 | CC_0361 | Phosphonates ABC transporter, permease protein; Identified by match to protein family HMM. | Phosphonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.997 |
| CC_0364 | CC_0362 | CC_0364 | CC_0362 | CBS domain protein; Identified by match to protein family HMM. | Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative. | 0.480 |
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