STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0380Beta-glucanase; Similar to GB:U04836 SP:P45798 PID:450183; identified by sequence similarity; putative. (301 aa)    
Predicted Functional Partners:
CC_0381
Multidrug resistance protein; Identified by match to protein family HMM.
 
     0.689
CC_0797
1,4-beta-D-glucan glucohydrolase D; Identified by match to protein family HMM.
  
 0.651
CC_2052
1,4-beta-D-glucan glucohydrolase D; Identified by match to protein family HMM.
  
 0.647
CC_0796
Alpha-glucosidase, putative; Similar to PID:1519526; identified by sequence similarity; putative.
 
     0.547
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.543
CC_1105
Periplasmic beta-glucosidase; Identified by match to protein family HMM; Belongs to the glycosyl hydrolase 3 family.
  
 0.539
CC_1757
Glycosyl hydrolase, family 30; Identified by match to protein family HMM; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.531
CC_2342
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      
 0.528
fljL
Flagellin FljL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
  
 0.526
CC_2454
Lipase/acylhydrolase, putative; Identified by match to protein family HMM.
  
   
 0.453
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.