Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0410 | CC_0411 | CC_0410 | CC_0411 | TPR domain protein; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.527 |
| CC_0410 | CC_0412 | CC_0410 | CC_0412 | TPR domain protein; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.530 |
| CC_0410 | CC_0562 | CC_0410 | CC_0562 | TPR domain protein; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.429 |
| CC_0410 | CC_0649 | CC_0410 | CC_0649 | TPR domain protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.568 |
| CC_0410 | CC_0970 | CC_0410 | CC_0970 | TPR domain protein; Identified by match to protein family HMM. | TonB-dependent receptor; Similar to GP:9187833; identified by sequence similarity; putative. | 0.551 |
| CC_0410 | CC_2743 | CC_0410 | CC_2743 | TPR domain protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.509 |
| CC_0410 | CC_2832 | CC_0410 | CC_2832 | TPR domain protein; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.493 |
| CC_0410 | CC_3504 | CC_0410 | CC_3504 | TPR domain protein; Identified by match to protein family HMM. | Identified by match to PFAM protein family HMM PF01431. | 0.437 |
| CC_0410 | dipM | CC_0410 | CC_1996 | TPR domain protein; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.467 |
| CC_0410 | ftsK | CC_0410 | CC_3704 | TPR domain protein; Identified by match to protein family HMM. | Cell division protein FtsK, putative; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the directi [...] | 0.685 |
| CC_0411 | CC_0410 | CC_0411 | CC_0410 | Conserved hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.527 |
| CC_0411 | CC_0412 | CC_0411 | CC_0412 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.801 |
| CC_0412 | CC_0410 | CC_0412 | CC_0410 | Conserved hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.530 |
| CC_0412 | CC_0411 | CC_0412 | CC_0411 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.801 |
| CC_0562 | CC_0410 | CC_0562 | CC_0410 | TonB-dependent receptor; Identified by match to protein family HMM. | TPR domain protein; Identified by match to protein family HMM. | 0.429 |
| CC_0562 | CC_0970 | CC_0562 | CC_0970 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Similar to GP:9187833; identified by sequence similarity; putative. | 0.773 |
| CC_0562 | CC_2832 | CC_0562 | CC_2832 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.769 |
| CC_0649 | CC_0410 | CC_0649 | CC_0410 | Hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.568 |
| CC_0649 | dipM | CC_0649 | CC_1996 | Hypothetical protein; Identified by Glimmer2; putative. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.469 |
| CC_0970 | CC_0410 | CC_0970 | CC_0410 | TonB-dependent receptor; Similar to GP:9187833; identified by sequence similarity; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.551 |
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