STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0439cheU protein; Similar to GB:X80205 PID:534997; identified by sequence similarity; putative. (127 aa)    
Predicted Functional Partners:
CC_0440
Chemotaxis protein CheYIII; Identified by match to protein family HMM.
  
    0.789
cheB1
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
    0.783
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
    0.783
CC_0435
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
  
    0.782
cheW
Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors.
  
    0.780
CC_0441
CheE protein; Identified by match to protein family HMM.
  
    0.777
CC_0433
Chemotaxis protein CheA; Identified by match to protein family HMM.
  
    0.776
CC_0437
Chemotaxis protein CheYII; Identified by match to protein family HMM.
  
    0.775
CC_0431
CheX protein; Similar to GP:3282790; identified by sequence similarity; putative.
  
    0.576
CC_0432
Chemotaxis protein CheYI; Identified by match to protein family HMM.
  
    0.575
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.