STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0455Alkaline phosphatase, putative; Similar to GP:5596813; identified by sequence similarity; putative. (564 aa)    
Predicted Functional Partners:
CC_1565
Alkaline phosphatase D; Similar to SP:P42251 PID:710013 PID:1680684 GB:AL009126; identified by sequence similarity; putative.
  
 
 
0.926
folE
GTP cyclohydrolase I; Identified by match to TIGR protein family HMM TIGR00063.
    
 0.918
CC_0416
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.914
CC_3158
6-pyruvoyl tetrahydrobiopterin synthase, putative; Identified by match to PFAM protein family HMM PF01242.
     
  0.900
CC_1375
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.622
CC_3272
Glycerophosphoryl diester phosphodiesterase; Similar to SP:P09394 GB:X56907 GB:Y00536 PID:41581 PID:902489; identified by sequence similarity; putative.
 
  
 0.560
CC_1295
3-phytase, fusion, putative; Identified by match to protein family HMM.
 
   
 0.547
CC_0454
TonB-dependent receptor; Similar to GP:9948370; identified by sequence similarity; putative.
 
     0.546
CC_2152
Secreted protein, putative; Identified by match to protein family HMM.
  
     0.421
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.