STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0461Conserved hypothetical protein; Identified by Glimmer2; putative. (153 aa)    
Predicted Functional Partners:
cysS
cysteinyl-tRNA synthetase; Identified by match to TIGR protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.773
CC_0462
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_1485
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.635
CC_0463
Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.608
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
       0.608
CC_0465
Identified by match to protein family HMM.
       0.608
CC_1125
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.580
flaEY
Regulatory protein FlaEY; Functions in trans to modulate the level of transcription of the flagellin genes and several genes encoding chemotaxis functions. It is itself temporally controlled.
  
    0.579
CC_2090
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.549
CC_0937
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.499
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.