hfsI protein (Caulobacter vibrioides CB15) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

hfsI

HfsI; Identified by Glimmer2; putative. (440 aa)

Predicted Functional Partners:

hfsF

0.949

hfsE

0.940

hfsH

0.918

hfsA

0.911

hfsG

0.895

hfsD

0.883

CC_2277

0.768

hfsB

0.764

pssY

0.751

hfaB

0.728

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_2277	hfaB	CC_2277	CC_2629	Identified by match to protein family HMM.	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	0.504
CC_2277	hfsA	CC_2277	CC_2431	Identified by match to protein family HMM.	HfsA; Identified by Glimmer2; putative.	0.679
CC_2277	hfsD	CC_2277	CC_2432	Identified by match to protein family HMM.	HfsD; Identified by Glimmer2; putative.	0.620
CC_2277	hfsE	CC_2277	CC_2425	Identified by match to protein family HMM.	HfsE; Identified by Glimmer2; putative.	0.706
CC_2277	hfsF	CC_2277	CC_2426	Identified by match to protein family HMM.	HfsF; Identified by match to protein family HMM.	0.719
CC_2277	hfsG	CC_2277	CC_2427	Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.693
CC_2277	hfsH	CC_2277	CC_2428	Identified by match to protein family HMM.	HfsH; Identified by match to PFAM protein family HMM PF01522.	0.911
CC_2277	hfsI	CC_2277	CC_0499	Identified by match to protein family HMM.	HfsI; Identified by Glimmer2; putative.	0.768
hfaB	CC_2277	CC_2629	CC_2277	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	Identified by match to protein family HMM.	0.504
hfaB	hfsA	CC_2629	CC_2431	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsA; Identified by Glimmer2; putative.	0.927
hfaB	hfsB	CC_2629	CC_2430	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsB; Identified by Glimmer2; putative.	0.730
hfaB	hfsD	CC_2629	CC_2432	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsD; Identified by Glimmer2; putative.	0.858
hfaB	hfsE	CC_2629	CC_2425	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsE; Identified by Glimmer2; putative.	0.515
hfaB	hfsF	CC_2629	CC_2426	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsF; Identified by match to protein family HMM.	0.898
hfaB	hfsG	CC_2629	CC_2427	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	Identified by match to protein family HMM.	0.878
hfaB	hfsH	CC_2629	CC_2428	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsH; Identified by match to PFAM protein family HMM PF01522.	0.877
hfaB	hfsI	CC_2629	CC_0499	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	HfsI; Identified by Glimmer2; putative.	0.728
hfsA	CC_2277	CC_2431	CC_2277	HfsA; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.679
hfsA	hfaB	CC_2431	CC_2629	HfsA; Identified by Glimmer2; putative.	hfaB protein; Required for the attachment of the holdfast to the cell. May be involved in the positive regulation of hfaC.	0.927
hfsA	hfsB	CC_2431	CC_2430	HfsA; Identified by Glimmer2; putative.	HfsB; Identified by Glimmer2; putative.	0.916