STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBHydroxyacylglutathione hydrolase, putative; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (249 aa)    
Predicted Functional Partners:
CC_1315
Lactoylglutathione lyase, putative; Identified by match to PFAM protein family HMM PF00903.
 
  
 0.965
CC_0518
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.920
CC_1183
Identified by match to protein family HMM.
  
 
0.913
CC_2505
Identified by match to protein family HMM; Belongs to the glutaredoxin family. Monothiol subfamily.
 
  
 0.638
CC_0520
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
 0.637
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
 
 0.548
CC_1933
Lactoylglutathione lyase, putative; Identified by match to protein family HMM.
     
 0.504
mraZ
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the MraZ family.
   
  
 0.493
CC_0521
Identified by match to protein family HMM; Belongs to the P(II) protein family.
       0.443
CC_0517
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.423
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.