STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0527Conserved hypothetical protein; Identified by Glimmer2; putative. (114 aa)    
Predicted Functional Partners:
CC_0528
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
      0.929
cenK
Sensor histidine kinase; Identified by match to protein family HMM.
 
     0.801
CC_0526
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.780
CC_0529
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_3199
Translation elongation factor EF-Tu; Identified by match to TIGR protein family HMM TIGR00485.
      
 0.733
CC_3459
Hypothetical protein; Identified by Glimmer2; putative.
      0.665
metXA
Homoserine O-acetyltransferase, putative; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
    0.560
CC_3397
Ribosomal-protein-alanine acetyltransferase, putative; Identified by match to protein family HMM.
  
     0.457
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.