STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenKSensor histidine kinase; Identified by match to protein family HMM. (501 aa)    
Predicted Functional Partners:
cenR
DNA-binding response regulator; Identified by match to protein family HMM.
 
 
 0.988
CC_1062
Sensor histidine kinase; Identified by match to protein family HMM.
  
   
 0.894
CC_2931
petR protein, putative; Identified by match to protein family HMM.
 
 
 0.850
CC_0527
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.801
CC_0529
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.784
CC_0526
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.767
CC_0528
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.762
CC_0588
Chemotaxis protein CheYI; Identified by match to protein family HMM.
 
 
 0.711
divJ
Sensor histidine kinase DivJ; Kinase required for the regulation of cell division and differentiation. Is part of a signal transduction pathway, activating PleD by phosphorylation.
  
  
 0.702
pleC
Non-motile and phage-resistance protein; Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator PleD, leading to its activation.
  
 
 
 0.700
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.