STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0566MoxR protein; Identified by match to PFAM protein family HMM PF01078. (323 aa)    
Predicted Functional Partners:
CC_0567
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.959
CC_0568
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.891
CC_0569
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.857
CC_0565
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.796
CC_2827
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.775
msrA2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity).
   
  
 0.733
CC_3252
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.731
CC_2906
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0276 family.
      
 0.730
CC_3255
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0276 family.
      
 0.730
CC_0564
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.