Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC_0572Conserved hypothetical protein; Identified by Glimmer2; putative. (527 aa)    
Predicted Functional Partners:
CC_2788
Genetic exchange protein, putative; Similar to GP:6467534; identified by sequence similarity; putative.
  
 
 0.834
CC_3691
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.795
CC_2233
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.788
CC_2362
Conserved hypothetical protein; Identified by Glimmer2; putative.
      
 0.788
CC_3385
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0246 family.
      
 0.788
CC_0812
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.764
CC_0543
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.756
CC_0798
Sialic acid-specific 9-O-acetylesterase, putative; Similar to GB:U40408 PID:1373055 PID:1628565 PID:1668766; identified by sequence similarity; putative.
 
 
 0.700
CC_2781
Hypothetical protein; Identified by Glimmer2; putative.
  
   0.684
CC_0795
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.658
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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