STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0590Hypothetical protein; Identified by Glimmer2; putative. (153 aa)    
Predicted Functional Partners:
CC_0594
Chemotaxis protein CheA; Identified by match to protein family HMM.
 
 
 0.968
CC_0433
Chemotaxis protein CheA; Identified by match to protein family HMM.
  
 
 0.933
CC_0591
Chemotaxis protein CheYII; Identified by match to protein family HMM.
 
  
 0.918
CC_1573
Chemotaxis MotB protein; Identified by match to protein family HMM.
 
  
 0.845
CC_1220
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.824
fliE
Flagellar hook-basal body complex protein FliE; Identified by match to TIGR protein family HMM TIGR00205.
 
 
 0.817
CC_0595
Chemotaxis protein CheW; Identified by match to protein family HMM.
 
  
 0.808
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
  
 0.797
CC_2175
FliN family protein; Identified by match to PFAM protein family HMM PF01052.
 
  
 0.788
cheL
Chemotactic signal-response protein CheL; Similar to GB:M91448 SP:P33980 PID:144242; identified by sequence similarity; putative.
 
  
 0.778
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.