STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctASodium:dicarboxylate symporter family protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (420 aa)    
Predicted Functional Partners:
CC_1906
Citrate synthase; Identified by match to protein family HMM; Belongs to the citrate synthase family.
  
  
 0.794
CC_3642
Citrate synthase; Identified by match to protein family HMM; Belongs to the citrate synthase family.
  
  
 0.794
CC_3643
Citrate synthase; Identified by match to protein family HMM.
  
  
 0.794
CC_0629
Sensor histidine kinase, putative; Identified by match to protein family HMM.
  
    0.785
CC_0630
Response regulator; Identified by match to protein family HMM.
  
  
 0.774
CC_2522
Isocitrate dehydrogenase, NADP-dependent; Identified by match to TIGR protein family HMM TIGR00127; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 
 0.767
phoU
Phosphate transport regulon regulator PhoU; Plays a role in the regulation of phosphate uptake.
      
 0.561
CC_2374
methylmalonyl-CoA mutase, alpha subunit; Identified by match to PFAM protein family HMM PF01642.
   
  
 0.539
CC_2373
methylmalonyl-CoA mutase, beta subunit; Identified by match to protein family HMM.
   
  
 0.527
CC_3549
NADP-dependent malic enzyme; Identified by match to PFAM protein family HMM PF01515.
  
  
 0.514
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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