CC_0630 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CC_0630

Response regulator; Identified by match to protein family HMM. (117 aa)

Predicted Functional Partners:

CC_0629

0.955

CC_2576

0.878

CC_2554

0.843

CC_3170

0.840

CC_0836

0.828

CC_3048

0.820

CC_2909

0.809

CC_1683

0.798

dctA

0.774

CC_3286

0.758

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0629	CC_0630	CC_0629	CC_0630	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Response regulator; Identified by match to protein family HMM.	0.955
CC_0629	CC_0836	CC_0629	CC_0836	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.575
CC_0629	CC_1683	CC_0629	CC_1683	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative.	0.465
CC_0629	CC_2554	CC_0629	CC_2554	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.561
CC_0629	CC_2576	CC_0629	CC_2576	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Response regulator; Identified by match to protein family HMM.	0.734
CC_0629	CC_2909	CC_0629	CC_2909	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.475
CC_0629	CC_3048	CC_0629	CC_3048	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.606
CC_0629	CC_3170	CC_0629	CC_3170	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.592
CC_0629	dctA	CC_0629	CC_0628	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sodium:dicarboxylate symporter family protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	0.785
CC_0630	CC_0629	CC_0630	CC_0629	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.955
CC_0630	CC_0836	CC_0630	CC_0836	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.828
CC_0630	CC_1683	CC_0630	CC_1683	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Similar to GP:2808506; identified by sequence similarity; putative.	0.798
CC_0630	CC_2554	CC_0630	CC_2554	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.843
CC_0630	CC_2576	CC_0630	CC_2576	Response regulator; Identified by match to protein family HMM.	Response regulator; Identified by match to protein family HMM.	0.878
CC_0630	CC_2909	CC_0630	CC_2909	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.809
CC_0630	CC_3048	CC_0630	CC_3048	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.820
CC_0630	CC_3170	CC_0630	CC_3170	Response regulator; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.840
CC_0630	CC_3286	CC_0630	CC_3286	Response regulator; Identified by match to protein family HMM.	Response regulator; Identified by match to protein family HMM.	0.758
CC_0630	dctA	CC_0630	CC_0628	Response regulator; Identified by match to protein family HMM.	Sodium:dicarboxylate symporter family protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	0.774
CC_0836	CC_0629	CC_0836	CC_0629	Sensor histidine kinase, putative; Identified by match to protein family HMM.	Sensor histidine kinase, putative; Identified by match to protein family HMM.	0.575