CC_0656 protein (Caulobacter vibrioides CB15)

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second shell of interactors

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Score

CC_0656

S4 domain protein; Identified by match to protein family HMM. (97 aa)

Predicted Functional Partners:

rplS

0.899

hslO

0.862

rplQ

0.856

rpmB

0.854

rpmH

0.846

rplN

0.841

rplM

0.839

rplV

0.838

rplT

0.836

rpmA

0.833

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0656	hslO	CC_0656	CC_2241	S4 domain protein; Identified by match to protein family HMM.	Chaperone protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.	0.862
CC_0656	rplM	CC_0656	CC_1376	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.839
CC_0656	rplN	CC_0656	CC_1258	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.841
CC_0656	rplQ	CC_0656	CC_1273	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L17; Identified by match to TIGR protein family HMM TIGR00059.	0.856
CC_0656	rplS	CC_0656	CC_0197	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.899
CC_0656	rplT	CC_0656	CC_1045	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.836
CC_0656	rplV	CC_0656	CC_1253	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.838
CC_0656	rpmA	CC_0656	CC_0318	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L27; Identified by match to TIGR protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.833
CC_0656	rpmB	CC_0656	CC_0661	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.854
CC_0656	rpmH	CC_0656	CC_0769	S4 domain protein; Identified by match to protein family HMM.	Ribosomal protein L34; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL34 family.	0.846
hslO	CC_0656	CC_2241	CC_0656	Chaperone protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.	S4 domain protein; Identified by match to protein family HMM.	0.862
rplM	CC_0656	CC_1376	CC_0656	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	S4 domain protein; Identified by match to protein family HMM.	0.839
rplM	rplN	CC_1376	CC_1258	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplM	rplQ	CC_1376	CC_1273	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L17; Identified by match to TIGR protein family HMM TIGR00059.	0.999
rplM	rplS	CC_1376	CC_0197	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rplM	rplT	CC_1376	CC_1045	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplM	rplV	CC_1376	CC_1253	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.999
rplM	rpmA	CC_1376	CC_0318	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L27; Identified by match to TIGR protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplM	rpmB	CC_1376	CC_0661	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L28; Identified by match to TIGR protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.998
rplM	rpmH	CC_1376	CC_0769	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L34; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL34 family.	0.993