CC_0684 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CC_0684

ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM. (726 aa)

Predicted Functional Partners:

CC_0683

0.995

pstB

0.906

CC_1009

0.874

CC_0681

0.813

CC_0305

0.759

CC_3420

0.743

CC_3274

0.720

CC_2610

0.705

CC_2092

0.629

CC_3714

0.629

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0305	CC_0684	CC_0305	CC_0684	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.759
CC_0681	CC_0684	CC_0681	CC_0684	Hypothetical protein; Identified by Glimmer2; putative.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.813
CC_0683	CC_0684	CC_0683	CC_0684	Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.995
CC_0683	CC_1009	CC_0683	CC_1009	Identified by match to protein family HMM.	RsaA secretion system, membrane protein RsaE; Identified by match to protein family HMM.	0.531
CC_0683	CC_2610	CC_0683	CC_2610	Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF00353.	0.581
CC_0684	CC_0305	CC_0684	CC_0305	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.759
CC_0684	CC_0681	CC_0684	CC_0681	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.813
CC_0684	CC_0683	CC_0684	CC_0683	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.995
CC_0684	CC_1009	CC_0684	CC_1009	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	RsaA secretion system, membrane protein RsaE; Identified by match to protein family HMM.	0.874
CC_0684	CC_2092	CC_0684	CC_2092	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.629
CC_0684	CC_2610	CC_0684	CC_2610	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF00353.	0.705
CC_0684	CC_3274	CC_0684	CC_3274	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.720
CC_0684	CC_3420	CC_0684	CC_3420	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.743
CC_0684	CC_3714	CC_0684	CC_3714	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.629
CC_0684	pstB	CC_0684	CC_0292	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.906
CC_1009	CC_0683	CC_1009	CC_0683	RsaA secretion system, membrane protein RsaE; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.531
CC_1009	CC_0684	CC_1009	CC_0684	RsaA secretion system, membrane protein RsaE; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.874
CC_1009	CC_2610	CC_1009	CC_2610	RsaA secretion system, membrane protein RsaE; Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF00353.	0.753
CC_2092	CC_0684	CC_2092	CC_0684	Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.629
CC_2610	CC_0683	CC_2610	CC_0683	Identified by match to PFAM protein family HMM PF00353.	Identified by match to protein family HMM.	0.581