CC_0690 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

CC_0690

Identified by match to PFAM protein family HMM PF00441. (435 aa)

Predicted Functional Partners:

CC_0299

0.980

CC_2170

0.921

CC_1813

0.911

CC_0244

0.908

CC_0076

0.906

CC_3462

0.900

CC_0353

0.810

CC_1233

0.810

CC_1352

0.805

CC_1723

0.804

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0076	CC_0353	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.951
CC_0076	CC_0690	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.906
CC_0076	CC_1352	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.925
CC_0076	CC_1723	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.928
CC_0076	CC_1813	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.804
CC_0076	CC_2170	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	propionyl-CoA carboxylase, beta subunit, putative; Identified by match to protein family HMM.	0.951
CC_0076	CC_3462	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to protein family HMM; Belongs to the thiolase-like superfamily. Thiolase family.	0.996
CC_0244	CC_0299	Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.916
CC_0244	CC_0690	Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.	Identified by match to PFAM protein family HMM PF00441.	0.908
CC_0299	CC_0244	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.	0.916
CC_0299	CC_0690	Conserved hypothetical protein; Identified by Glimmer2; putative.	Identified by match to PFAM protein family HMM PF00441.	0.980
CC_0299	CC_1813	Conserved hypothetical protein; Identified by Glimmer2; putative.	Identified by match to PFAM protein family HMM PF00378.	0.595
CC_0353	CC_0076	Identified by match to PFAM protein family HMM PF00378.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.951
CC_0353	CC_0690	Identified by match to PFAM protein family HMM PF00378.	Identified by match to PFAM protein family HMM PF00441.	0.810
CC_0353	CC_1352	Identified by match to PFAM protein family HMM PF00378.	Identified by match to PFAM protein family HMM PF00378.	0.619
CC_0353	CC_1723	Identified by match to PFAM protein family HMM PF00378.	Identified by match to PFAM protein family HMM PF00378.	0.537
CC_0353	CC_2170	Identified by match to PFAM protein family HMM PF00378.	propionyl-CoA carboxylase, beta subunit, putative; Identified by match to protein family HMM.	0.922
CC_0353	CC_3462	Identified by match to PFAM protein family HMM PF00378.	Identified by match to protein family HMM; Belongs to the thiolase-like superfamily. Thiolase family.	0.599
CC_0690	CC_0076	Identified by match to PFAM protein family HMM PF00441.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.906
CC_0690	CC_0244	Identified by match to PFAM protein family HMM PF00441.	Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.	0.908