STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0729Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa)    
Predicted Functional Partners:
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 
 0.912
cobQ-2
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 
 0.912
CC_0672
Cobalamin biosynthesis protein; Identified by sequence similarity; putative.
    
  0.900
CC_3021
Cobalamin biosynthesis protein; Similar to GB:M62869 SP:P29933 PID:151168 PID:1926457; identified by sequence similarity; putative.
     
  0.900
CC_0730
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.719
CC_0728
Hypothetical protein; Identified by Glimmer2; putative.
       0.475
CC_0727
Electron transfer flavoprotein, beta subunit; Identified by match to PFAM protein family HMM PF01012.
  
    0.464
CC_0726
Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.
       0.454
CC_2601
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.445
CC_2138
5-methyltetrahydrofolate--homocysteine methyltransferase; Similar to SP:P37586 GB:X52093; identified by sequence similarity; putative.
 
   
 0.425
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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