STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0743Formiminoglutamase, putative; Similar to GP:2642341; identified by sequence similarity; putative. (282 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; Identified by match to protein family HMM; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
 
 0.852
cpdR
CpdR.
       0.541
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.500
CC_2345
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0262 family.
 
     0.500
CC_0961
Chlorohydrolase; Identified by match to PFAM protein family HMM PF01685.
 
  
 0.499
CC_0742
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.498
hutH
Histidine ammonia-lyase; Identified by match to protein family HMM; Belongs to the PAL/histidase family.
  
  
 0.470
CC_2220
Cation transport protein, putative; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
 
    0.470
CC_0827
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.445
CC_3164
Transcriptional regulator, Cro/CI family; Identified by match to protein family HMM.
  
    0.444
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.