Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0783 | CC_0784 | CC_0783 | CC_0784 | Transcriptional regulator, GntR family; Identified by match to protein family HMM. | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 0.712 |
| CC_0783 | CC_0785 | CC_0783 | CC_0785 | Transcriptional regulator, GntR family; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.716 |
| CC_0784 | CC_0783 | CC_0784 | CC_0783 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Transcriptional regulator, GntR family; Identified by match to protein family HMM. | 0.712 |
| CC_0784 | CC_0785 | CC_0784 | CC_0785 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.997 |
| CC_0784 | CC_0820 | CC_0784 | CC_0820 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Smp-30/Cgr1 family protein; Similar to GB:AL009126; identified by sequence similarity; putative. | 0.505 |
| CC_0784 | CC_1057 | CC_0784 | CC_1057 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 2-dehydro-3-deoxygluconokinase; Identified by match to protein family HMM. | 0.825 |
| CC_0784 | CC_1488 | CC_0784 | CC_1488 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.508 |
| CC_0784 | CC_1495 | CC_0784 | CC_1495 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 0.952 |
| CC_0784 | CC_1496 | CC_0784 | CC_1496 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Carbohydrate kinase, pfkB family; Identified by match to protein family HMM. | 0.751 |
| CC_0784 | CC_3248 | CC_0784 | CC_3248 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Glyceraldehyde 3-phosphate dehydrogenase; Identified by match to protein family HMM; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.634 |
| CC_0784 | edd | CC_0784 | CC_2055 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.712 |
| CC_0784 | zwf | CC_0784 | CC_2057 | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.679 |
| CC_0785 | CC_0783 | CC_0785 | CC_0783 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, GntR family; Identified by match to protein family HMM. | 0.716 |
| CC_0785 | CC_0784 | CC_0785 | CC_0784 | Conserved hypothetical protein; Identified by Glimmer2; putative. | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 0.997 |
| CC_0785 | CC_0820 | CC_0785 | CC_0820 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Smp-30/Cgr1 family protein; Similar to GB:AL009126; identified by sequence similarity; putative. | 0.480 |
| CC_0820 | CC_0784 | CC_0820 | CC_0784 | Smp-30/Cgr1 family protein; Similar to GB:AL009126; identified by sequence similarity; putative. | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 0.505 |
| CC_0820 | CC_0785 | CC_0820 | CC_0785 | Smp-30/Cgr1 family protein; Similar to GB:AL009126; identified by sequence similarity; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.480 |
| CC_1057 | CC_0784 | CC_1057 | CC_0784 | 2-dehydro-3-deoxygluconokinase; Identified by match to protein family HMM. | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 0.825 |
| CC_1057 | CC_1488 | CC_1057 | CC_1488 | 2-dehydro-3-deoxygluconokinase; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.868 |
| CC_1057 | CC_1495 | CC_1057 | CC_1495 | 2-dehydro-3-deoxygluconokinase; Identified by match to protein family HMM. | 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; Identified by match to protein family HMM. | 0.951 |
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