STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0826Conserved hypothetical protein; Identified by Glimmer2; putative. (985 aa)    
Predicted Functional Partners:
CC_1301
iolB protein; Similar to SP:P42413 PID:709982 PID:904208 PID:2280501 GB:AL009126; identified by sequence similarity; putative.
   
    0.765
CC_0622
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.751
CC_0825
Hypothetical protein; Identified by Glimmer2; putative.
       0.586
CC_0827
Hypothetical protein; Identified by Glimmer2; putative.
       0.584
CC_0620
Type I restriction-modification system, M subunit, putative; Identified by match to protein family HMM.
 
  
 0.563
CC_0621
Type I restriction-modification system, S subunit; Identified by match to protein family HMM.
 
  
 0.551
CC_0828
Identified by match to PFAM protein family HMM PF00795.
  
    0.548
CC_0829
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
       0.548
CC_0830
Identified by match to protein family HMM.
  
    0.496
CC_1757
Glycosyl hydrolase, family 30; Identified by match to protein family HMM; Belongs to the glycosyl hydrolase 30 family.
   
    0.414
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.