STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0864Hypothetical protein; Identified by Glimmer2; putative. (242 aa)    
Predicted Functional Partners:
CC_0865
Hypothetical protein; Identified by Glimmer2; putative.
     0.994
CC_3223
Phosphomethylpyrimidine kinase; Identified by match to TIGR protein family HMM TIGR00097.
  
  
 0.902
CC_0863
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.793
CC_0866
Hypothetical protein; Identified by Glimmer2; putative.
       0.701
CC_0867
Hypothetical protein; Identified by Glimmer2; putative.
       0.673
CC_1881
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.673
CC_0862
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.648
CC_0868
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.617
CC_3726
Molybdopterin biosynthesis protein MoeB; Identified by match to PFAM protein family HMM PF00899.
 
  
 0.606
thiG
thiG protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.583
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.