STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0899Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. (703 aa)    
Predicted Functional Partners:
CC_0898
Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.989
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
  
 0.988
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). Belongs to the FliN/MopA/SpaO family.
 
 
 0.986
FlgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
  
 0.984
flgG
Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
  
 0.981
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction.
 
  
 0.979
fliQ
Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis; Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.978
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.974
fliP
Flagellar biosynthesis protein FliP; May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors; Belongs to the FliP/MopC/SpaP family.
 
  
 0.973
fliI
Flagellum-specific ATP synthase FliI; Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum.
 
  
 0.973
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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