STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0899Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. (703 aa)    
Predicted Functional Partners:
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
  
 0.994
FlgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
  
 0.993
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction.
 
  
 0.992
flgG
Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
  
 0.992
CC_0901
Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.988
FlgB
Flagellar basal-body rod protein FlgB, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.988
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.987
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). Belongs to the FliN/MopA/SpaO family.
 
 
 0.986
cheL
Chemotactic signal-response protein CheL; Similar to GB:M91448 SP:P33980 PID:144242; identified by sequence similarity; putative.
 
  
 0.984
CC_0750
Chemotaxis MotA protein; Identified by match to protein family HMM.
 
  
 0.983
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.