Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0899 | CC_0901 | CC_0899 | CC_0901 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | 0.988 |
| CC_0899 | CC_2839 | CC_0899 | CC_2839 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.979 |
| CC_0899 | FlgB | CC_0899 | CC_0953 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar basal-body rod protein FlgB, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.988 |
| CC_0899 | FlgC | CC_0899 | CC_0954 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | 0.993 |
| CC_0899 | flgG | CC_0899 | CC_2064 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | 0.992 |
| CC_0899 | flgH | CC_0899 | CC_2066 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.987 |
| CC_0899 | flgI | CC_0899 | CC_2582 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.961 |
| CC_0899 | fliE | CC_0899 | CC_0955 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar hook-basal body complex protein FliE; Identified by match to TIGR protein family HMM TIGR00205. | 0.970 |
| CC_0899 | fliF | CC_0899 | CC_0905 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. | 0.992 |
| CC_0899 | fliG | CC_0899 | CC_0906 | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.994 |
| CC_0901 | CC_0899 | CC_0901 | CC_0899 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | 0.988 |
| CC_0901 | CC_2839 | CC_0901 | CC_2839 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.986 |
| CC_0901 | FlgB | CC_0901 | CC_0953 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal-body rod protein FlgB, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.998 |
| CC_0901 | FlgC | CC_0901 | CC_0954 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | 0.997 |
| CC_0901 | flgG | CC_0901 | CC_2064 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family. | 0.997 |
| CC_0901 | flgH | CC_0901 | CC_2066 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.998 |
| CC_0901 | flgI | CC_0901 | CC_2582 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.998 |
| CC_0901 | fliE | CC_0901 | CC_0955 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-basal body complex protein FliE; Identified by match to TIGR protein family HMM TIGR00205. | 0.994 |
| CC_0901 | fliF | CC_0901 | CC_0905 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. | 0.994 |
| CC_0901 | fliG | CC_0901 | CC_0906 | Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.983 |
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