STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0916Organic hydroperoxide resistance protein; Similar to SP:O68390; identified by sequence similarity; putative. (138 aa)    
Predicted Functional Partners:
CC_0915
Transcriptional regulator, MarR family; Identified by match to protein family HMM.
  
 0.988
CC_2016
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM.
    0.544
CC_2873
Dps family protein; Identified by match to PFAM protein family HMM PF02047; Belongs to the Dps family.
  
  
 0.523
CC_0938
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0337 (CsbD) family.
  
  
 0.477
CC_3428
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM.
  
  
 0.461
CC_2670
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
   
  
 0.444
CC_2971
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM.
   
  
 0.444
CC_1365
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.433
CC_0629
Sensor histidine kinase, putative; Identified by match to protein family HMM.
   
    0.422
CC_2965
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0339 family.
   
    0.416
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.