STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0931Conserved hypothetical protein; Identified by Glimmer2; putative. (401 aa)    
Predicted Functional Partners:
lolD1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.996
lolD2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.972
CC_1930
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 
0.925
CC_0930
HlyD family secretion protein, putative; Identified by match to protein family HMM; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.899
CC_2091
ABC transporter, ATP-binding protein; Identified by match to protein family HMM.
  
 
 0.831
CC_3705
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.749
CC_0649
Hypothetical protein; Identified by Glimmer2; putative.
 
   0.612
pal
OmpA family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.477
CC_0929
IS298, transposase OrfB; Similar to GB:X71024 GB:M96454 SP:Q08082 PID:454221; identified by sequence similarity; putative.
       0.474
CC_0933
Transcriptional regulator; Similar to GB:M65201 GB:X82941 PID:142275 PID:599613 SP:P55324; identified by sequence similarity; putative.
  
    0.468
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.