STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0933Transcriptional regulator; Similar to GB:M65201 GB:X82941 PID:142275 PID:599613 SP:P55324; identified by sequence similarity; putative. (191 aa)    
Predicted Functional Partners:
CC_1659
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.657
CC_1367
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.649
CC_3319
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0335 family.
  
     0.623
CC_2102
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.605
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
    0.581
CC_3537
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.567
CC_2218
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.565
CC_2141
Transcriptional regulator, ArsR family; Identified by match to protein family HMM.
  
   
 0.529
popZ
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.493
lolD1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
    0.481
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.