STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (554 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase; Identified by match to protein family HMM; Belongs to the PAL/histidase family.
 
 0.999
hutI
Imidazolonepropionase; Identified by match to protein family HMM; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.998
CC_0958
Formiminoglutamase; Similar to GP:2642341; identified by sequence similarity; putative.
 
  
 0.826
CC_0961
Chlorohydrolase; Identified by match to PFAM protein family HMM PF01685.
 
  
 0.813
CC_0962
Histidine utilization repressor; Identified by match to protein family HMM.
 
  
 0.746
accA
acetyl-CoA carboxylase, carboxyl transferase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
     
 0.691
CC_0116
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.675
CC_0956
Hypothetical protein; Identified by Glimmer2; putative.
       0.664
CC_1347
Delta-aminolevulinic acid dehydratase; Identified by match to PFAM protein family HMM PF00490; Belongs to the ALAD family.
      
 0.636
CC_3125
Xaa-Pro dipeptidase, putative; Identified by match to protein family HMM.
  
  
 0.634
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.