STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0962Histidine utilization repressor; Identified by match to protein family HMM. (235 aa)    
Predicted Functional Partners:
CC_0961
Chlorohydrolase; Identified by match to PFAM protein family HMM PF01685.
  
 0.973
hutI
Imidazolonepropionase; Identified by match to protein family HMM; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.904
hutH
Histidine ammonia-lyase; Identified by match to protein family HMM; Belongs to the PAL/histidase family.
 
  
 0.840
CC_0958
Formiminoglutamase; Similar to GP:2642341; identified by sequence similarity; putative.
 
  
 0.818
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.746
CC_0449
PTS system, N-acetylglucosamine-specific IIABC component; Identified by match to protein family HMM.
  
  
 0.500
CC_0538
PTS system, N-acetylglucosamine-specific IIABC component; Identified by match to protein family HMM.
  
  
 0.500
CC_0443
N-acetylglucosamine-6-phosphate deacetylase; Identified by match to TIGR protein family HMM TIGR00221.
 
  
 0.489
CC_0537
PTS system, fructose-specific EIIA/HPr/EI components; Identified by match to protein family HMM.
  
  
 0.488
CC_0534
N-acetylglucosamine-6-phosphate deacetylase; Identified by match to TIGR protein family HMM TIGR00221.
 
  
 0.485
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.