CC_0980 protein (Caulobacter vibrioides CB15)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

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Score

CC_0980

Major facilitator family transporter; Identified by match to protein family HMM. (567 aa)

Predicted Functional Partners:

CC_0981

0.566

CC_0982

0.563

CC_0979

0.534

CC_2412

0.443

CC_0983

0.418

CC_0978

0.408

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0978	CC_0979	alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative.	Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM.	0.590
CC_0978	CC_0980	alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative.	Major facilitator family transporter; Identified by match to protein family HMM.	0.408
CC_0979	CC_0978	Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM.	alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative.	0.590
CC_0979	CC_0980	Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM.	Major facilitator family transporter; Identified by match to protein family HMM.	0.534
CC_0980	CC_0978	Major facilitator family transporter; Identified by match to protein family HMM.	alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative.	0.408
CC_0980	CC_0979	Major facilitator family transporter; Identified by match to protein family HMM.	Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM.	0.534
CC_0980	CC_0981	Major facilitator family transporter; Identified by match to protein family HMM.	RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily.	0.566
CC_0980	CC_0982	Major facilitator family transporter; Identified by match to protein family HMM.	Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative.	0.563
CC_0980	CC_0983	Major facilitator family transporter; Identified by match to protein family HMM.	TonB-dependent receptor; Identified by match to protein family HMM.	0.418
CC_0980	CC_2412	Major facilitator family transporter; Identified by match to protein family HMM.	Major facilitator family transporter; Identified by match to protein family HMM.	0.443
CC_0981	CC_0980	RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily.	Major facilitator family transporter; Identified by match to protein family HMM.	0.566
CC_0981	CC_0982	RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily.	Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative.	0.960
CC_0981	CC_0983	RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily.	TonB-dependent receptor; Identified by match to protein family HMM.	0.558
CC_0982	CC_0980	Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative.	Major facilitator family transporter; Identified by match to protein family HMM.	0.563
CC_0982	CC_0981	Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative.	RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily.	0.960
CC_0982	CC_0983	Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative.	TonB-dependent receptor; Identified by match to protein family HMM.	0.674
CC_0983	CC_0980	TonB-dependent receptor; Identified by match to protein family HMM.	Major facilitator family transporter; Identified by match to protein family HMM.	0.418
CC_0983	CC_0981	TonB-dependent receptor; Identified by match to protein family HMM.	RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily.	0.558
CC_0983	CC_0982	TonB-dependent receptor; Identified by match to protein family HMM.	Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative.	0.674
CC_2412	CC_0980	Major facilitator family transporter; Identified by match to protein family HMM.	Major facilitator family transporter; Identified by match to protein family HMM.	0.443