Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0886 | CC_0980 | CC_0886 | CC_0980 | Riboflavin synthase, alpha subunit; Identified by match to TIGR protein family HMM TIGR00187. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.447 |
| CC_0886 | rpmE | CC_0886 | CC_3275 | Riboflavin synthase, alpha subunit; Identified by match to TIGR protein family HMM TIGR00187. | Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.663 |
| CC_0886 | rpmJ | CC_0886 | CC_3321 | Riboflavin synthase, alpha subunit; Identified by match to TIGR protein family HMM TIGR00187. | Ribosomal protein L36; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL36 family. | 0.663 |
| CC_0978 | CC_0979 | CC_0978 | CC_0979 | alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative. | Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM. | 0.590 |
| CC_0978 | CC_0980 | CC_0978 | CC_0980 | alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.416 |
| CC_0979 | CC_0978 | CC_0979 | CC_0978 | Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM. | alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative. | 0.590 |
| CC_0979 | CC_0980 | CC_0979 | CC_0980 | Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.533 |
| CC_0979 | CC_0981 | CC_0979 | CC_0981 | Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.406 |
| CC_0980 | CC_0886 | CC_0980 | CC_0886 | Major facilitator family transporter; Identified by match to protein family HMM. | Riboflavin synthase, alpha subunit; Identified by match to TIGR protein family HMM TIGR00187. | 0.447 |
| CC_0980 | CC_0978 | CC_0980 | CC_0978 | Major facilitator family transporter; Identified by match to protein family HMM. | alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative. | 0.416 |
| CC_0980 | CC_0979 | CC_0980 | CC_0979 | Major facilitator family transporter; Identified by match to protein family HMM. | Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM. | 0.533 |
| CC_0980 | CC_0981 | CC_0980 | CC_0981 | Major facilitator family transporter; Identified by match to protein family HMM. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.571 |
| CC_0980 | CC_0982 | CC_0980 | CC_0982 | Major facilitator family transporter; Identified by match to protein family HMM. | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | 0.563 |
| CC_0980 | CC_0983 | CC_0980 | CC_0983 | Major facilitator family transporter; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.418 |
| CC_0980 | CC_2412 | CC_0980 | CC_2412 | Major facilitator family transporter; Identified by match to protein family HMM. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.441 |
| CC_0980 | CC_3714 | CC_0980 | CC_3714 | Major facilitator family transporter; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.419 |
| CC_0980 | rpmE | CC_0980 | CC_3275 | Major facilitator family transporter; Identified by match to protein family HMM. | Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. | 0.592 |
| CC_0980 | rpmJ | CC_0980 | CC_3321 | Major facilitator family transporter; Identified by match to protein family HMM. | Ribosomal protein L36; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL36 family. | 0.451 |
| CC_0981 | CC_0979 | CC_0981 | CC_0979 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | Peptidyl-prolyl cis-trans isomerase A; Identified by match to protein family HMM. | 0.406 |
| CC_0981 | CC_0980 | CC_0981 | CC_0980 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | Major facilitator family transporter; Identified by match to protein family HMM. | 0.571 |
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