Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0335 | CC_0442 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.543 |
| CC_0335 | CC_0981 | TonB-dependent receptor; Identified by match to protein family HMM. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.404 |
| CC_0335 | CC_0982 | TonB-dependent receptor; Identified by match to protein family HMM. | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | 0.608 |
| CC_0335 | CC_0983 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.604 |
| CC_0335 | CC_2257 | TonB-dependent receptor; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.691 |
| CC_0442 | CC_0335 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.543 |
| CC_0442 | CC_0983 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.562 |
| CC_0442 | CC_1970 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Similar to GP:9946027; identified by sequence similarity; putative. | 0.736 |
| CC_0442 | CC_2257 | TonB-dependent receptor; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.622 |
| CC_0442 | CC_3336 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor, putative; Identified by match to protein family HMM. | 0.532 |
| CC_0981 | CC_0335 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.404 |
| CC_0981 | CC_0982 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | 0.962 |
| CC_0981 | CC_0983 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.563 |
| CC_0982 | CC_0335 | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.608 |
| CC_0982 | CC_0981 | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.962 |
| CC_0982 | CC_0983 | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.680 |
| CC_0982 | CC_1809 | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | TonB-dependent receptor; Similar to GP:9946027; identified by sequence similarity; putative. | 0.430 |
| CC_0982 | CC_1970 | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | TonB-dependent receptor; Similar to GP:9946027; identified by sequence similarity; putative. | 0.505 |
| CC_0982 | CC_3336 | Regulatory protein PupR, putative; Similar to GB:X77918 PID:525260; identified by sequence similarity; putative. | TonB-dependent receptor, putative; Identified by match to protein family HMM. | 0.644 |
| CC_0983 | CC_0335 | TonB-dependent receptor; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.604 |
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