STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsaAS-layer protein RsaA; The S-layer is a paracrystalline mono-layered assembly of proteins which coats the surface of bacteria. Probably acts as a physical barrier to parasites and lytic enzymes. (1073 aa)    
Predicted Functional Partners:
CC_1008
RsaA secretion system, ATP-binding protein RsaD; Identified by match to protein family HMM.
 
   
 0.776
CC_1141
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.738
CC_1009
RsaA secretion system, membrane protein RsaE; Identified by match to protein family HMM.
 
   
 0.658
CC_0557
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.644
CC_0572
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.542
CC_1006
Transcriptional regulator, Cro/CI family; Identified by match to protein family HMM.
       0.536
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
      
 0.511
CC_1017
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.493
CC_3341
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.490
fljK
Flagellin FljK; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
      
 0.485
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.